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Choose region of interest

pick_region.Rd

The function extracts the selected regions or hemisphere (or a combination of both) from the specified sensor coordinates.

Usage

pick_region(
  coords = NULL,
  hemisphere = c("left", "right", "midline"),
  region = c("frontal", "central", "parietal", "occipital", "temporal", "face"),
  ROI = NULL,
  tol = 1e-06
)

Arguments

coords

A data frame, matrix or named tibble with numeric columns of "x" and "y" sensor coordinates. If not defined, HCGSN256 template is used. See details for more information about coordinate requirements.

hemisphere

A character vector denoting hemisphere to choose. Possible values: "left", "right", "midline" or any combination of them. If not defined, both hemispheres with midline are chosen.

region

A character vector denoting region to choose. Possible values: "frontal", "central", "parietal", "occipital", "temporal", "face" or any combination of them. If not defined, all regions are chosen.

ROI

A character or factor vector with labels of regions, aligned row-wise with coords. If not defined, the predefined vector (according to HCGSN256 template determined by an expert from Central European Institute of Technology, Masaryk University, Brno, Czech Republic) is used.

tol

A numeric value indicating tolerance for midline selection. (Values of x fulfilling abs(x) < tol are denoted as midline.) Default value is 1e-6.

Value

A tibble or data frame subset of coords filtered by the selected region and hemisphere criteria.

Details

If the coords input is data frame or matrix with no named columns, the first column is considered as "x" coordinate and second as "y" coordinate. For the correct selection of the hemisphere with own coordinates, it is necessary that the 2D layout is oriented with the nose up and that the midline electrodes should have a zero x-coordinate (or approximately zero within tolerance). Otherwise, the results will not match reality.

Notes: The option hemisphere = "left" (respectively hemisphere = "right") means only the left hemisphere without the midline. If you want to include midline as well, use hemisphere = c("left", "midline") (respectively hemisphere = c("right", "midline")).

The matching of region/hemisphere is exact and the function will stop with an the function stops with an error if no coordinates match the requested region and hemisphere combination.

See also

point_mesh

Examples


# Choosing regions from HCGSN256 template
# a) temporal region in left hemisphere
pick_region(hemisphere = "left", region = "temporal")
#> # A tibble: 19 × 3
#>        x       y sensor
#>    <dbl>   <dbl> <chr> 
#>  1 -271.  129.   E61   
#>  2 -254.   79.9  E62   
#>  3 -229    38.0  E63   
#>  4 -317.  103.   E67   
#>  5 -295    50.0  E68   
#>  6 -267.    5.76 E69   
#>  7 -232.  -21.6  E70   
#>  8 -364.   70.8  E73   
#>  9 -257.  -57.3  E74   
#> 10 -220.  -78.8  E75   
#> 11 -400.    5.00 E82   
#> 12 -276. -101.   E83   
#> 13 -238. -120.   E84   
#> 14 -431.  -46.8  E91   
#> 15 -389   -90.0  E92   
#> 16 -349. -128.   E93   
#> 17 -300. -141.   E94   
#> 18 -405  -153    E102  
#> 19 -356. -182.   E103  
# b) frontal and central region
region_fc <- pick_region(region = c("frontal", "central"))
head(region_fc)
#> # A tibble: 6 × 3
#>       x     y sensor
#>   <dbl> <dbl> <chr> 
#> 1 224.   199. E1    
#> 2 177.   199. E2    
#> 3 132    191  E3    
#> 4  94.5  176. E4    
#> 5  62    153  E5    
#> 6  43.2  124. E6    
# c) left hemisphere including midline
hemi_lm <- pick_region(hemisphere = c("left", "midline"))
head(hemi_lm)
#> # A tibble: 6 × 3
#>       x     y sensor
#>   <dbl> <dbl> <chr> 
#> 1   0    64.9 E8    
#> 2 -19.9  25.7 E9    
#> 3   0   130.  E15   
#> 4 -21.5  95.0 E16   
#> 5 -36.3  53.8 E17   
#> 6   0   200   E21   
# plot the result in c)
plot(hemi_lm$x, hemi_lm$y, pch = 16, asp = 1)